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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs8037321 chr15:29413377 T/C 0.000147 65 7.6 31.27 25.77 KM Plot
UVM rs8038396 chr15:40957370 A/C 1.26E-5 67 27.87 24.87 17.07 KM Plot
UVM rs8040755 chr15:40660192 C/T 5.12E-7 66 26.55 24.87 1.27 KM Plot
UVM rs8042733 chr15:40853920 C/T 0.000214 67 27.88 24.87 16.78 KM Plot
UVM rs9288314 chr2:201794173 A/T 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs958340 chr12:9806654 G/A 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs9788169 chr12:132625105 G/A 5.64E-5 66 31.83 23.25 0.4 KM Plot
UVM rs9919759 chr12:9808775 T/C 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs9919786 chr12:9808721 G/T 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs9919787 chr12:9808776 G/A 0.000125 67 27.88 21.8 7.6 KM Plot